Package: triversity 2.0

Robin Lamarche-Perrin

triversity: Diversity Measures on Multipartite Graphs

Computing diversity measures on multipartite graphs. This package first implements a parametrized family of such diversity measures which apply on probability distributions. Sometimes called "True Diversity", this family contains famous measures such as the richness, the Shannon entropy, the Herfindahl-Hirschman index, and the Berger-Parker index. Second, the package allows to apply these measures on probability distributions resulting from random walks between the parts of multipartite graphs. By defining an initial distribution on a given part of the graph and a path to follow between the different parts, the probability of the walker's position within the final part is then computed, thus providing a particular instance of diversity to measure.

Authors:Robin Lamarche-Perrin [aut, cre]

triversity_2.0.tar.gz
triversity_2.0.zip(r-4.7)triversity_2.0.zip(r-4.6)triversity_2.0.zip(r-4.5)
triversity_2.0.tgz(r-4.6-any)triversity_2.0.tgz(r-4.5-any)
triversity_2.0.tar.gz(r-4.7-any)triversity_2.0.tar.gz(r-4.6-any)
triversity_2.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html
card.svg |card.png
triversity/json (API)

# Install 'triversity' in R:
install.packages('triversity', repos = c('https://lamarche-perrin.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/lamarche-perrin/triversity/issues

Datasets:

On CRAN:

Conda:

3.32 score 3 stars 14 scripts 105 downloads 7 exports 4 dependencies

Last updated from:554552e6fa. Checks:7 ERROR, 2 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64ERROR118
source / vignettesOK186
linux-release-x86_64ERROR113
macos-release-arm64ERROR99
macos-oldrel-arm64ERROR105
windows-develERROR62
windows-releaseERROR72
windows-oldrelERROR71
wasm-releaseOK138

Exports:get_all_diversitiesget_distribution_from_pathget_diversity_from_distributionget_diversity_from_pathget_diversity_from_transitionget_multipartiteget_transition_from_path

Dependencies:data.treeR6slamstringi